Author Title [ Type(Desc)] Year
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Journal Article
R. S. McClure, Rericha, Y., Waters, K. M., and Tanguay, R. L., “3' RNA-seq is superior to standard RNA-seq in cases of sparse data but inferior at identifying toxicity pathways in a model organism.”, Front Bioinform, vol. 3, p. 1234218, 2023.
L. B. Wilson, McClure, R. S., Waters, K. M., Simonich, M. T., and Tanguay, R. L., “Concentration-response gene expression analysis in zebrafish reveals phenotypically-anchored transcriptional responses to retene.”, Front Toxicol, vol. 4, p. 950503, 2022.
C. I. Rude, Tidwell, L. G., Tilton, S. C., Waters, K. M., Anderson, K. A., and Tanguay, R. L., “Coupling Environmental Whole Mixture Toxicity Screening with Unbiased RNA-Seq Reveals Site-Specific Biological Responses in Zebrafish.”, Toxics, vol. 11, no. 3, 2023.
H. M. Dixon, Bramer, L. M., Scott, R. P., Calero, L., Holmes, D., Gibson, E. A., Cavalier, H. M., Rohlman, D., Miller, R. L., Calafat, A. M., Kincl, L., Waters, K. M., Herbstman, J. B., and Anderson, K. A., “Evaluating predictive relationships between wristbands and urine for assessment of personal PAH exposure.”, Environ Int, vol. 163, p. 107226, 2022.
L. M. Bramer, Dixon, H. M., Degnan, D. J., Rohlman, D., Herbstman, J. B., Anderson, K. A., and Waters, K. M., “Expanding the access of wearable silicone wristbands in community-engaged research through best practices in data analysis and integration.”, Pac Symp Biocomput, vol. 29, pp. 170-186, 2024.
L. M. Bramer, Dixon, H. M., Degnan, D. J., Rohlman, D., Herbstman, J. B., Anderson, K. A., and Waters, K. M., “Expanding the access of wearable silicone wristbands in community-engaged research through best practices in data analysis and integration.”, bioRxiv, 2023.
P. Shankar, McClure, R. S., Waters, K. M., and Tanguay, R. L., “Gene co-expression network analysis in zebrafish reveals chemical class specific modules.”, BMC Genomics, vol. 22, no. 1, p. 658, 2021.
L. Truong, Marvel, S., Reif, D. M., Thomas, D. G., Pande, P., Dasgupta, S., Simonich, M. T., Waters, K. M., and Tanguay, R. L., “The multi-dimensional embryonic zebrafish platform predicts flame retardant bioactivity.”, Reprod Toxicol, vol. 96, pp. 359-369, 2020.
L. M. Bramer, Dixon, H. M., Rohlman, D., Scott, R. P., Miller, R. L., Kincl, L., Herbstman, J. B., Waters, K. M., and Anderson, K. A., “PM Is Insufficient to Explain Personal PAH Exposure.”, Geohealth, vol. 8, no. 2, p. e2023GH000937, 2024.
S. M. McLarnan, Bramer, L. M., Dixon, H. M., Scott, R. P., Calero, L., Holmes, D., Gibson, E. A., Cavalier, H. M., Rohlman, D., Miller, R. L., Kincl, L., Waters, K. M., Anderson, K. A., and Herbstman, J. B., “Predicting personal PAH exposure using high dimensional questionnaire and wristband data.”, J Expo Sci Environ Epidemiol, 2024.
S. J. C. Gosline, Kim, D. Nam, Pande, P., Thomas, D. G., Truong, L., Hoffman, P., Barton, M., Loftus, J., Moran, A., Hampton, S., Dowson, S., Franklin, L., Degnan, D., Anderson, L., Thessen, A., Tanguay, R. L., Anderson, K. A., and Waters, K. M., “The Superfund Research Program Analytics Portal: linking environmental chemical exposure to biological phenotypes.”, Sci Data, vol. 10, no. 1, p. 151, 2023.