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About EHSC
Q&A with Center Director
Center Members
Becoming a Center Member
Cite the PNWC-TEHR
Contact Us
News and Events
Seminars
Previous Seminars
News and Announcements
Publications
Resources
Discovery Index
Infographics
Center Resources (One Pagers)
Facility Cores
Community Engagement
Community-Engaged Projects
Air Pollution
Harney County Health Department Arsenic Collaboration
Flame retardants
Community Outreach
Videos
About CEC
CEC Stakeholder Advisory Board
CEC SAB Members
Zebrafish Biomedical Research
SARL Zebrafish Orders
Tanguay Lab
Chemical Exposure
Translational Research Support
Discovery Index
Pilot Projects
Pilot Project Awardees
Career Development
T32 Training Grant
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News and Events
Publications
Author
Title
Type
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Year
]
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Waters, Katrina M
[Clear All Filters]
2023
R. S. McClure
,
Rericha, Y.
,
Waters, K. M.
, and
Tanguay, R. L.
,
“
3' RNA-seq is superior to standard RNA-seq in cases of sparse data but inferior at identifying toxicity pathways in a model organism.
”
,
Front Bioinform
, vol. 3, p. 1234218, 2023.
PubMed
C. I. Rude
,
Tidwell, L. G.
,
Tilton, S. C.
,
Waters, K. M.
,
Anderson, K. A.
, and
Tanguay, R. L.
,
“
Coupling Environmental Whole Mixture Toxicity Screening with Unbiased RNA-Seq Reveals Site-Specific Biological Responses in Zebrafish.
”
,
Toxics
, vol. 11, no. 3, 2023.
PubMed
L. M. Bramer
,
Dixon, H. M.
,
Degnan, D. J.
,
Rohlman, D.
,
Herbstman, J. B.
,
Anderson, K. A.
, and
Waters, K. M.
,
“
Expanding the access of wearable silicone wristbands in community-engaged research through best practices in data analysis and integration.
”
,
bioRxiv
, 2023.
PubMed
S. J. C. Gosline
,
Kim, D. Nam
,
Pande, P.
,
Thomas, D. G.
,
Truong, L.
,
Hoffman, P.
,
Barton, M.
,
Loftus, J.
,
Moran, A.
,
Hampton, S.
,
Dowson, S.
,
Franklin, L.
,
Degnan, D.
,
Anderson, L.
,
Thessen, A.
,
Tanguay, R. L.
,
Anderson, K. A.
, and
Waters, K. M.
,
“
The Superfund Research Program Analytics Portal: linking environmental chemical exposure to biological phenotypes.
”
,
Sci Data
, vol. 10, no. 1, p. 151, 2023.
PubMed
2022
L. B. Wilson
,
McClure, R. S.
,
Waters, K. M.
,
Simonich, M. T.
, and
Tanguay, R. L.
,
“
Concentration-response gene expression analysis in zebrafish reveals phenotypically-anchored transcriptional responses to retene.
”
,
Front Toxicol
, vol. 4, p. 950503, 2022.
PubMed
H. M. Dixon
,
Bramer, L. M.
,
Scott, R. P.
,
Calero, L.
,
Holmes, D.
,
Gibson, E. A.
,
Cavalier, H. M.
,
Rohlman, D.
,
Miller, R. L.
,
Calafat, A. M.
,
Kincl, L.
,
Waters, K. M.
,
Herbstman, J. B.
, and
Anderson, K. A.
,
“
Evaluating predictive relationships between wristbands and urine for assessment of personal PAH exposure.
”
,
Environ Int
, vol. 163, p. 107226, 2022.
PubMed
2021
P. Shankar
,
McClure, R. S.
,
Waters, K. M.
, and
Tanguay, R. L.
,
“
Gene co-expression network analysis in zebrafish reveals chemical class specific modules.
”
,
BMC Genomics
, vol. 22, no. 1, p. 658, 2021.
PubMed
2020
L. Truong
,
Marvel, S.
,
Reif, D. M.
,
Thomas, D. G.
,
Pande, P.
,
Dasgupta, S.
,
Simonich, M. T.
,
Waters, K. M.
, and
Tanguay, R. L.
,
“
The multi-dimensional embryonic zebrafish platform predicts flame retardant bioactivity.
”
,
Reprod Toxicol
, vol. 96, pp. 359-369, 2020.
PubMed