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In Press
T. J. Sharpton, Alexiev, A., and Tanguay, R. L., “Defining the environmental determinants of dysbiosis at scale with zebrafish”, Current Opinion in Toxicology, vol. 36, p. 100430, In Press.
J. S. Koning, Subramanian, A., Alotaibi, M., Appel, C. L., Sullivan, C. M., Chao, T., Truong, L., Tanguay, R. L., Jaiswal, P., Levi, T., and Lesmeister, D. B., “Njobvu-AI: An open-source tool for collaborative image labeling and implementation of computer vision models”, arXiv, In Press.
2023
R. S. McClure, Rericha, Y., Waters, K. M., and Tanguay, R. L., “3' RNA-seq is superior to standard RNA-seq in cases of sparse data but inferior at identifying toxicity pathways in a model organism.”, Front Bioinform, vol. 3, p. 1234218, 2023.
L. B. Wilson, Moran, I. L., Anderson, K. A., and Tanguay, R. L., “Advances in PAH mixture toxicology enabled by zebrafish.”, Curr Opin Toxicol, vol. 34, 2023.
J. Raber, Stagaman, K., Kasschau, K. D., Davenport, C., Lopes, L., Nguyen, D., Torres, E. Ruth, Sharpton, T. J., and Kisby, G., “Behavioral and Cognitive Performance Following Exposure to Second-Hand Smoke (SHS) from Tobacco Products Associated with Oxidative-Stress-Induced DNA Damage and Repair and Disruption of the Gut Microbiome.”, Genes (Basel), vol. 14, no. 9, 2023.
Monica L. Vermillion Maier, Siddens, L. K., Pennington, J. M., Uesugi, S. L., Tilton, S. C., Vertel, E. A., Anderson, K. A., Tidwell, L. G., Ognibene, T. J., Turteltaub, K. W., Smith, J. N., and Williams, D. E., “Benzo[a]pyrene toxicokinetics in humans following dietary supplementation with 3,3'-diindolylmethane (DIM) or Brussels sprouts.”, Toxicol Appl Pharmacol, vol. 460, p. 116377, 2023.
E. Atusingwize, Rohlman, D., Hoffman, P., Wafula, S. Tsebeni, Musoke, D., Buregyeya, E., Mugambe, R. K., Ndejjo, R., Ssempebwa, J. C., and Anderson, K. A., “Chemical contaminant exposures assessed using silicone wristbands among fuel station attendants, taxi drivers and commercial motorcycle riders in Kampala, Uganda.”, Arch Environ Occup Health, pp. 1-11, 2023.
T. D. Henderson, Choi, J., Leonard, S. W., Head, B., Tanguay, R. L., Barton, C. L., and Traber, M. G., “Chronic Vitamin E Deficiency Dysregulates Purine, Phospholipid, and Amino Acid Metabolism in Aging Zebrafish Skeletal Muscle.”, Antioxidants (Basel), vol. 12, no. 6, 2023.
L. St Mary, Truong, L., Bieberich, A. A., Fatig, R. O., Rajwa, B., and Tanguay, R. L., “Comparative analysis between zebrafish and an automated live-cell assay to classify developmental neurotoxicant chemicals.”, Toxicol Appl Pharmacol, p. 116659, 2023.
D. Rohlman, Attridge, S., O'Malley, K., and Anderson, K. A., “Composition of Wildfire Smoke and Health Risks”, Oregon Climate Change Research Institute, 2023.
C. C. Ghetu, Moran, I. L., Scott, R. P., Tidwell, L. G., Hoffman, P. D., and Anderson, K. A., “Concurrent assessment of diffusive and advective PAH movement strongly affected by temporal and spatial changes.”, Sci Total Environ, p. 168765, 2023.
C. I. Rude, Tidwell, L. G., Tilton, S. C., Waters, K. M., Anderson, K. A., and Tanguay, R. L., “Coupling Environmental Whole Mixture Toxicity Screening with Unbiased RNA-Seq Reveals Site-Specific Biological Responses in Zebrafish.”, Toxics, vol. 11, no. 3, 2023.
S. Dasgupta, La Du, J. K., Garcia, G. R., Li, S., Tomono-Duval, K., Rericha, Y., Huang, L., and Tanguay, R. L., “A CRISPR-Cas9 mutation in sox9b long intergenic noncoding RNA (slincR) affects zebrafish development, behavior, and regeneration.”, Toxicol Sci, 2023.
A. J. Green, Truong, L., Thunga, P., Leong, C., Hancock, M., Tanguay, R. L., and Reif, D. M., “Deep autoencoder-based behavioral pattern recognition outperforms standard statistical methods in high-dimensional zebrafish studies.”, bioRxiv, 2023.
S. M. Samon, Rohlman, D., Tidwell, L., Hoffman, P. D., Oluyomi, A. O., Walker, C., Bondy, M., and Anderson, K. A., “Determinants of exposure to endocrine disruptors following hurricane Harvey.”, Environ Res, vol. 217, p. 114867, 2023.
I. L. Moran, Tidwell, L., Barton, M., Kile, M., Miller, P., Rohlman, D., Seguinot-Medina, S., Ungwiluk, B., Waghiyi, V., and Anderson, K., “Diffusive fluxes of persistent organic pollutants between Arctic atmosphere, surface waters and sediments.”, Sci Total Environ, p. 164566, 2023.
L. M. Bramer, Dixon, H. M., Degnan, D. J., Rohlman, D., Herbstman, J. B., Anderson, K. A., and Waters, K. M., “Expanding the access of wearable silicone wristbands in community-engaged research through best practices in data analysis and integration.”, bioRxiv, 2023.
J. M. Huizenga and Semprini, L., “Fluorescent spectroscopy paired with parallel factor analysis for quantitative monitoring of phenanthrene biodegradation and metabolite formation.”, Chemosphere, vol. 316, p. 137771, 2023.
M. L. Vermilli Maier, Siddens, L. K., Pennington, J. M., Uesugi, S. L., Labut, E. M., Vertel, E. A., Anderson, K. A., Tidwell, L. G., Tilton, S. C., Ognibene, T. J., Turteltaub, K. W., Smith, J. N., and Williams, D. E., “Impact of phenanthrene co-administration on the toxicokinetics of benzo[a]pyrene in humans. UPLC-accelerator mass spectrometry following oral microdosing.”, Chem Biol Interact, vol. 382, p. 110608, 2023.
S. M. Samon, Barton, M., Anderson, K., Oluyomi, A., Bondy, M., Armstrong, G., and Rohlman, D., “Integrating participant feedback and concerns to improve community and individual level chemical exposure assessment reports.”, BMC Public Health, vol. 23, no. 1, p. 1732, 2023.
H. Parhizkar, Fretz, M., Laguerre, A., Stenson, J., Corsi, R. L., Van Den Wymelenberg, K. G., and Gall, E. T., “A novel VOC breath tracer method to evaluate indoor respiratory exposures in the near- and far-fields; implications for the spread of respiratory viruses.”, J Expo Sci Environ Epidemiol, vol. 33, no. 3, pp. 339-346, 2023.
Y. Rericha, Simonich, M., Truong, L., and Tanguay, R. L., “Review of the Zebrafish as a Model to Investigate per- and Polyfluoroalkyl Substance Toxicity.”, Toxicol Sci, 2023.
E. M. Bonner, Horn, G. P., Smith, D. L., Kerber, S., Fent, K. W., Tidwell, L. G., Scott, R. P., Adams, K. T., and Anderson, K. A., “Silicone passive sampling used to identify novel dermal chemical exposures of firefighters and assess PPE innovations.”, Int J Hyg Environ Health, vol. 248, p. 114095, 2023.
S. J. C. Gosline, Kim, D. Nam, Pande, P., Thomas, D. G., Truong, L., Hoffman, P., Barton, M., Loftus, J., Moran, A., Hampton, S., Dowson, S., Franklin, L., Degnan, D., Anderson, L., Thessen, A., Tanguay, R. L., Anderson, K. A., and Waters, K. M., “The Superfund Research Program Analytics Portal: linking environmental chemical exposure to biological phenotypes.”, Sci Data, vol. 10, no. 1, p. 151, 2023.
D. J. Elson and Kolluri, S. K., “Tumor-Suppressive Functions of the Aryl Hydrocarbon Receptor (AhR) and AhR as a Therapeutic Target in Cancer.”, Biology (Basel), vol. 12, no. 4, 2023.

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